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Tarca, A. L., Romero, R. & Draghici, S. Analysis of microarray experiments of gene expression profiling.
Comparative genomic hybridization microarray experiments of deletion strains indicated that deletions were generated only in expected regions of the genome.
PCA was conducted with normalized intensity-data of all microarray experiments of Col-0 and Tsu-0 accessions except control and 5 day-datasets in R with prcomp function and ggord plugin for ggplot2 graphics library.
We show that the technical difficulties in microarray experiments of working with small amounts of tissue material, inherent to working with Drosophila, are surmountable.
In the microarray experiments of Liu et al, several putative regulators were upregulated in D. radiodurans following exposure to 15,000 Gy [46].
In contrast, at lower doses (3,000 Gy), the D. radiodurans microarray experiments of Tanaka et al detected only one upregulated putative regulator (DdrO) (DR2574) [92].
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The datasets consist of 27 different microarray experiments, out of which 10 experiments are time series (see Additional file 3).
The RNA extraction and microarray experiment of the first internal cohort has been reported previously [ 4].
The raw data (cel file) of microarray experiment of Arabidopsis from TAIR (AtGenExpress) were used to identify up-regulated CDS of Arabidopsis response to salt stress.
The top 100 ranked miRNAs were compared to a similar list derived from a miRNA microarray experiment of the same samples as a measure of consistency.
The RNA samples from the microarray experiment of the high phenanthrene (45.80 mg kg-1) concentration exposure were used for quantitative RT PCR (qPCR).
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