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39 genes were differentially expressed in both individual microarray experiments, based on at least two-fold up- or downregulation (Table S1).
We used these probes in microarray experiments based on the GRS/A mouse strain, which frequently suffers from (MMTV -induced MMTV -induceds [ 36].
Thirty-four FFPET samples were selected for microarray experiments based on total RNA yield >2 μg and 260 of 230 ultraviolet absorbance ⩾1.8.
Several expression microarray experiments based on the wild-type strain and mutant strains including both overproducing and defected strains were later on released [ 6, 28- 30].
Papaya is a member of family Caricaceae within the Brassicales, the same order as the 'model plant' Arabidopsis thaliana, which has been the object of many microarray experiments based on commercially available oligo-chips.
All ventricular microarray experiments based on the Affymetrix U133A or U133 2.0 platform for which raw CEL files were available, were collected from Gene Expression Omnibus [ 16] and Harvard's Cardiogenomics website (http://www.cardiogenomics.org, Jan 2007).
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It has been identified by a recent protein microarray experiment based on a blood test as one of four serum markers for discriminating between healthy groups and patients with epithelial ovarian cancer (EOC) [42].
A similar claim has already been made by Efron and Thibsirani [ 32] who address the problem of identifying differentially expressed groups of genes from a microarray experiment based on the gene set enrichment analysis (GSEA).
In general, microarray experiments are based on paired comparisons [ 29].
The cDNA microarray experiments are based on the Arabidopsis GEM1 clone set purchased from InCyte Genomics, Palo Alto, CA, USA consisting of circa 8000 ESTs corresponding about 6500 unique genes [ 4].
In the first quarter of 2014 alone more than 1600 experiments based on DNA microarrays were uploaded to the functional genomics experiment database operated by the European Bioinformatics Institute (termed ArrayExpress [ 3]).
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