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The results of the differential expression analyses as well as the raw data can be accessed from each gene page and a track for each microarray experiment showing differential expression can be viewed using the genome browser [ 40].
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A whole-genome microarray experiment showed that the best molecular markers for grouping human fat cells are: 1) MPZL2, HOXC9, EBF3, FBXO31, and LEP, as WAT markers; 2) TMEM269, TMEM26, and SHOX2, as beige/brite markers; and 3) UCP1, LHX8, and ZIC1, as BAT markers (Table 1) (Cypess et al., 2013).
I think it would be better if the steps of microarray experiment shown in the figure correspond to the steps described under Biological background of microarray experiments.
For example, microarray experiment showed that a M. truncatula sequence showing similarities to the gene 12-oxophytodienoate reductase (OPR2) was more expressed in P665 than in Mesire.
For instance, miRNA microarray experiment showed the upregulation or maintenance of 6 miRNAs and downregulation of 16 miRNAs by Fgf signaling (Yin et al. 2008).
The results of the first microarray experiment showed that of the more than 50,000 transcripts, 2445 transcripts displayed significant differential expression (more than 1.6-fold changes) in the PC-treated OA meniscal cells compared with the untreated OA meniscal cells.
The current microarray experiment showed that genes encoding several important antioxidant enzymes and other proteins involved in redox homeostasis were responsive to the feeding of zooplankton at the 9 mm sampling time point.
While this outcome may be surprising, it is entirely consistent with microarray experiments showing a smaller transcriptional change in Eutrema plants exposed to salt compared to other stresses [ 7, 47, 48].
Quantification of the proportion of replicated chromosome as a function of time during S-phase confirmed the same trend as seen for microarray experiments showing that replication of Sakl0C-left is completed significantly earlier than for all the other chromosomes (supplementary fig. S5, Supplementary Material online).
Microarray experiments showed that downregulation of either CNOT subunit resulted in elevated expression of major histocompatibility complex class II (MHC II) genes which are found in a gene cluster on chromosome 6.
Preliminary microarray experiments showed that this library contains sufficient chemical diversity to identify lead peptides with measurable target binding affinity and specificity (CWD and SAJ unpublished data).
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