Sentence examples for microarray designs contain from inspiring English sources

Our microarray designs contain hundreds or thousands of genomic DNA regions centered at putative DNA binding sites for the TFs of interest (see Section 2 for details).

The microarray design contains multiple probes for each gene sequence or each group of homologous sequences.

In total, the promoter microarray design contains 1,951,339 probes, comprised of 46,302 contiguous sequences with a median length of ∼4 kb.

This microarray design contains 2704 probes directed to the most conserved regions of the 6294 annotated potential coding sequences from N. gonorrhoeae strain FA1090 [ 16], N. meningitidis strains MC58 [ 29] and Z2491 [ 30], and additional sequence from N. gonorrhoeae strain MS11 including the Gonococcal Genetic Island [ 21].

As the EST library from which our microarray was designed contained only one AGAMOUS gene (most similar to AGAMOUS1 of Aquilegia alpine, AqAG1), no data are available for the expression of the second previously characterized locus, AqAG2, although studies indicate that this gene is carpel-specific [23].

For an accurate comparison with NPPOC, a microarray was designed containing oligonucleotides that share a common sequence but were synthesized with two chemistries, NPPOC as a reference, and either Bz- or SPh-NPPOC.

Before EuroPineDB was constructed -- based on the existing putative UniGenes http://cbi.labri.fr/outils/SAM/COMPLETE/index.php ID=gemini -- an EST-based microarray was designed containing 3456 spots printed twice with clones taken from the Pin, Gemini and CK16 gene libraries only (Table 2) [ 22].

In the current study a set of 5 custom tiling microarrays was designed, containing probes for the mouse "regulome" (transcription start sites ±8 kb of 23,393 autosomal genes).

As genomic sequences from multiple strains of the same species become available, multistrain microarrays are designed, containing spots for every unique gene in all sequenced strains.

Note however that the decreased quality of the RNA-amplification only weakly shifts the rising branch of the hook curve, in contrast to the overall dilution effect shown in Figure 5. Microarrays of the GenChip-design contain special probe sets for estimating the 3'/5'-amplification bias.

In addition, undetectable spots represent a large problem for two-color microarray designs and most arrays contain at least 40% undetectable spots even when labeled with reference samples such as Stratagene's Universal Reference RNAs™.