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Microarray design has been described previously [39].
There are several important considerations regarding microarray design and analysis.
Improved versions (v2) of the X. tropicalis genome-wide microarray design and the promoter microarray design are available at the authors' web site (http://www.ncmls.nl/gertjanveenstra).nl/gertjanveenstra
Appropriate microarray design is fundamental to the success of these experiments.
A whole-genome and a promoter tile path microarray design was developed.
Extension of this novel microarray design strategy to viruses, antimicrobial resistance elements or toxins is straightforward.
These results have implications for microarray design, optimization and analysis methods.
The microarray design contains multiple probes for each gene sequence or each group of homologous sequences.
For the analysis of promoter binding the promoter microarray design for X. tropicalis can be used.
The miRNA location array was custom-made by Agilent with AMADID (Agilent Microarray Design Identifier) 014119.
Microarray design and hybridization.
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