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Toward this end, we collected 2,482 paired (test/control) human microarray datasets encompassing a variety of cell conditions.
To investigate expression of Populus BAHD genes, we mined a set of nine Affymetrix microarray datasets encompassing five different genotypes and four different tissue types generated in our laboratory [ 24].
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Spurious correlations between adjacent and periodically spaced genes were previously identified by gene-gene correlations across experimental datasets encompassing multiple microarrays [ 21- 23].
Four previously published datasets encompassing a large number of transcriptomic analysis utilizing Arabidopsis Affymetrix ATH1 microarrays were used for this experiment.
We provide several demonstration datasets, encompassing continuous phylogeographic, discrete phylogeographic and discrete biogeographic scenarios.
Relationships of the Pelecaniformes were inferred through parsimony analyses of an osteological dataset encompassing 59 taxa and 464 characters.
The microarray datasets analyzed in this article are available in Gene Expression Omnibus, accession number GSE80748.
Expression of the 10 selected reference genes in the microarray datasets.
Our proposed method is tested on both binary-class and multi-class microarray datasets.
To validate the proposed method, we conducted extensive experiments on six benchmarked microarray datasets.
We applied this algorithm to 18 yeast time-series microarray datasets.
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