Exact(2)
In order to assess whether therapy resistance might underlie the change of the tumor phenotype toward a mesenchymal/basal phenotype, we collected a cohort of 93 microarray datasets comprising murine xenografts of human tumors before and after hormonal therapies.
Underlying GeneFriends is a Mus musculus co-expression map created from 1,678 microarray datasets, comprising over 20,000 individual samples from previously published experiments.
Similar(58)
Because microarray datasets comprise tens of thousands of features (genes), they are usually used to test the dimension reduction techniques.
A publicly available Affymetrix microarray dataset comprising ~24,000 genes was downloaded from AtGenExpress.
To investigate the clinical relevance of our observations, we analyzed a microarray dataset comprising 285 primary ovarian cancer patient specimens [ 19].
Expression of cPLA2 α was investigated in a second gene expression microarray dataset comprising 295 breast cancer patients from The Netherland Cancer Institute (van de Vijver et al, 2002).
Recently, we reported in Nagalla et al. [ 36] the discovery of three biologically distinct immune gene signatures, or metagenes, in a large microarray dataset comprising 1,954 breast tumor expression profiles.
Twenty-one datasets comprising microarray data of breast cancer samples and annotations on patients' clinical outcome were collected.
Microarray data for the seven datasets comprising forty Erlotinib-sensitive and resistant microarrays, having 32062 common genes were combined for analysis using RankProd software [ 17].
Five datasets comprising 214 microarrays and 28235 genes for Gefitinib-sensitive and resistant cell lines were combined into a single excel spreadsheet and analyzed using RankProd.
Here we present a global metaanalysis comparing transcriptional profiles from matched pairs of EGFR inhibitor-sensitive vs. -resistant cell lines, using 15 datasets comprising 274 microarrays.
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