Sentence examples for microarray dataset by from inspiring English sources

The protein dataset was further compared to the microarray dataset by extracting the GI numbers from the protein results.

The breast carcinoma microarray dataset by Ambs and colleagues distinguished between genes expressed by tumor cells versus stromal cells [ 24].

Our results demonstrated that it is feasible to identify the differentially expressed lncRNA in the microarray dataset by functional reannotation.

Similarly, we generated a random mRNA microarray dataset by randomly choosing the same number of mRNA microarray data from the original mRNA microarray dataset.

Candidate reference genes were pre-screened from public transcriptome microarray datasets by a novel systematic strategy, and then experimental evaluation of the candidates was conducted using qRT-PCR and a rigorous statistical analysis.

The gene targets of highly expressed miRNAs on aggregate tend to display a lower overall expression [23], [33], which can be detected in microarray datasets by comparing their expression levels of target vs. non-target mRNAs with a Wilcoxon rank-sum test [34].

Also, we explored BLBC and TNBC in two large microarray datasets by comparing the expression levels of the five markers according to the subtypes.

Thus, we used this opportunity to compare and contrast metagene score distributions between the SURGbx and FNAbx microarray datasets by box and whisker plot analysis (Additional file 2).

The package simplifies CNV analysis, facilitating validation and optimization of QC thresholds and we would encourage researchers with large ImmunoChip, MetaboChip or other custom genotyping array datasets, to obtain further value from their microarray datasets by exploring rare CNV associations with their phenotype.

Matching gene-expression and miRNA profiles of 215 sporadic breast cancer specimens were obtained by mining a microarray dataset described by Buffa et al. [ 23], in GEO (Accession number GSE22220), samples BCmicroRNA 1 to 110).

Analysis of the bladder carcinoma microarray dataset published by Radvanyi and colleagues [ 25] showed HBEGF to be overrepresented in infiltrating carcinoma samples (Additional file 1: Figure S10B).