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For all genes analyzed, the expression profiles agreed with the microarray data, though the sample size was too small to reach significance in all samples.
The expression pattern for the remaining 6 genes also qualitatively matched to microarray data, though they were not quantitatively matched (Table 2).
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Another example is a single-gene network inferred from microarray data even though the samples may be collected over a time course or multiple conditions.
In contrast, the expression patterns of the other genes were very similar to microarray data, even though observed differences were not always significant.
No resource can currently identify expression pattern of specific mRNA forms using these microarray data, even though it is possible to do this.
However, we did not observe significant 3' bias as we were able to correlate our microarray data even though the qRT-PCR primers were selected from sequences away from the 3' end of the transcripts.
Thus, the initiation of lateral root primordia is a NaCl-stress response that appears to be distinctly represented within our microarray data, even though the process involves only a small number of cells within the entire root.
In the context of microarray data analysis, though the curves under the null hypothesis simply take the form of a constant line, there are many patterns of gene expression changes across the time points.
Furthermore, based on modified approaches, adopted from the DNA microarray field, the first bioinformatic standards for performing the antibody microarray data analysis have emerged, though general standard operating procedure(s) remains to be implemented.
Suitable summary statistics of correlation for expression divergence of a gene family can be found in Gu [ 39] and Gu et al. [ 40], though microarray data were the primary focus in these studies.
As for the L1 and iL3 data, this suggests that the dynamic range over which the observed experimental L2 microarray data fall is generally correct, though somewhat constrained compared with the actual differences in observed expression.
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