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Microarray data specifically generated for this study are MIAME compliant.
RankProd package analyses gene expression microarray data specifically to identify differentially expressed genes.
With the aim of identifying chemosensitivity genes, the inclusion of resistant cell lines may be advantageous by increasing the range of expression in the measured microarray data, specifically for the genes involved in development of resistance.
For differential gene expression, datasets were analyzed by HTself, a self-self based statistical method for low replication microarray data, specifically those obtained from isolated cancer cell types [ 8].
In order to validate the microarray data, specifically for those transcripts exclusively expressed in oocyte or CCs, we analyzed the expression of some selected genes using semi-quantitative PCR.
In the TCGA dataset, exome coverage was a more sensitive detector of intragenic deletion than microarray data, specifically the Affymetrix SNP6.0 and Agilent array-CGH platforms, although all DNA measures lacked the sensitivity of mRNA assays (Supplemental Fig. S1b, c).
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In this paper, a novel Bio-inspired Multi-objective algorithm is proposed for gene selection in microarray data classification specifically in the binary domain of feature selection.
In evaluating the predictive performance, we used as induction algorithm a linear SVM classifier, which is widely considered the "best of class" method in the context of microarray data analysis; specifically, we employed the SVM implementation provided by WEKA.
To validate the microarray data and to specifically measure the effects of Toxoplasma infection on miRNAs encoded by miR-17∼92 miR-17∼92∼363 and miR-106a∼363 we took two orthogonandapproaches.
In light of this and other ion-transport linked possibilities, the microarray data were reexamined specifically for responses of Na+ transporter encoding genes in the rice genome.
According to the microarray data, AtSK31 is specifically expressed during the latter stages of floral development, where it is closely associated with pollen development in mature stamens [ 27].
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