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We are indebted to all research groups who made their microarray data publicly available.
We found 41 of the 85 clinical trials (48%) made their microarray data publicly available on the internet.
We compared the citation impact of clinical trials which made their cancer microarray data publicly available to the citation impact of trials which did not.
We assessed whether each of these trials made its microarray data publicly available by examining a variety of publication and internet resources.
In order to get a general view of the expression of these two genes in hematological tumors, we have carried out expression studies by quantitative RT PCR in a limited collection of hematopoietic tumors and, in addition, by in silico profiling using microarray data publicly available at the Oncomine database.
Gene expression microarrays were performed according to established protocols [ 10, 11], with all microarray data publicly available at the UNC microarray database (UNCMD) https://genome.unc.edu/.unc.edu/
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The original microarray data are publicly available, he notes.
Protocols and microarray data are publicly available at www.ebi.ac.uk/arrayexpress: A-MEXP-75 and E-MEXP-1199 E-MEXP-1199 E-MEXP-1199
Genes possessing L1s were determined by L1base [17] and expression microarray data is publicly available data from the GEO [35], [36].
All microarray data is publicly available in accordance with MIAME GEOO accession numbers GPL8767, GSE16852), and the complete list of differentially expressed probe sets is provided in Table S1.
Finally, according to MIAME recommendations and in order to ensure that all information is given in detail so results can be easily understood, reproduced and compared, all microarray data are publicly available in the Gene Expression Ommibus (GEO) database (GEO ID: GSE14807).
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