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An examination of the microarray data located at "The Diurnal Project" (http://diurnal.cgrb.oregonstate.edu/) shows AOP2 exhibiting a very low level of expression in Col that peaks around midday when plants are grown in LD conditions at constant temperature [ 39].
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The microarray data were validated by qPCR.
To further confirm our microarray data, we selected genes located in two clusters that encode putative transporters for validation by β-galactosidase activity assays and EMSA.
Our microarray data provides evidence for rpoE2-dependent transcription in eight IGRs where sRNA genes are located: SmelA018, SmelA060, SMa_sRNA_126, SMb_sRNA_381, SMb_sRNA_432 (SMb_sRNA_433Mb_sRNA_433 (Smel-B127ov), SMc_sRNA_259, and SMc_sRNA_259.
The microarray data clearly denoted that disruption of subtelomeric chromatin does not alter the differential behaviour of genes located at chromosomal flanks.
Finally, several PS located in intron 7 of the sequestosome 1 (SQSTM1) gene were expressed according to the microarray data (Figure 3C).
Human microarray platform, GPL1528; human HCC microarray data, GSE1898; mouse microarray platform, GPL1529; mouse HCC microarray data, GSE1897.
Saldana, A.J. Java Treeview - extensible visualization of microarray data.
Impute: impute: Imputation for microarray data.
microarray data reproduced, but some concerns remain.
Ball, C.A. et al. Standards for microarray data.
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