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The microarray data for brain Treg cells are available in the Gene Expression Omnibus (GEO) database under accession number GSE109259.
Geometric Biclustering (GBC) algorithm is used to find the common patterns in given microarray data for neural processing.
Our method incorporates multivariate correlations in microarray data for survival outcomes.
Supplemental Table 1 contains light vs. dark NSF45K microarray data for all oligos reporting on alternative transcripts.
We analyzed the microarray data for general trends in alternative splicing in terms of absolute expression and differential expression.
For diseases, we used the Gene Expression Omnibus (GEO) repository to generate microarray data for disease samples and control samples.
Clustering of microarray data for these genes revealed that high YY1/E2F3 activity positively correlates with survival of patients treated with the microtubule-stabilizing drug paclitaxel.
Table 1 provides the microarray data for genes misregulated in both heart and fibroblasts.
The annotated microarray data for the sample set is available on GEO (www.ncbi.nlm.nih.gov/geo, GSE17381).
The results confirmed the microarray data for all genes tested, and are shown in Dataset S2.
The microarray data for this study have been submitted to NCBI GEO with accession GSE7376.
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