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It is noteworthy that hfq was the only full ORF contained within our microarray data covering this region of the genome (Figure 3c).
With the integration of protein-protein interactions data, transcriptional regulatory interactions (TRIs) data and microarray data covering hepatitis C, cirrhosis and Barcelona Clinic Liver Cancer (BCLC) staging HCC, we carried out a dynamic biological network analysis for the progression of HCV induced hepatocarcinogenesis.
To obtain microarray data covering almost all genes in rice, total RNA from different samples described above was mixed into a big pool called Pre-amplified mRNA sample (PAM) by almost equal magnitude.
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The TRUNCATULIX data warehouse integrates five public databases for gene sequences, and gene annotations, as well as a database for microarray expression data covering raw data, normalized datasets, and complete expression profiling experiments.
We analyzed NH1, NH2, NH3, NH4, and NH5 expression levels from 32 publicly available Affymetrix rice microarray data sets covering a broad range of experimental and developmental conditions (conditions listed in Additional file 6: Table S1).
We also used a similar strategy to generate a list of 758 placenta-enriched genes using the GeneAtlas microarray data set covering whole placental and other human tissues [ 23] (see Methods for further details).
Different data sources such as DNA microarrays and, complementing, qualitative data covering several human and mouse tissues are integrated and analyzed with a Bootstrap scoring approach in order to extract disease relevance of the genes.
Also, a more general approach such as GeneMiner (which is a meta-analysis approach that integrates data of heterogeneous origin e.g. DNA microarrays and complementing qualitative data covering several human and mouse tissues related to T2DM) has identified several functional T2DM candidate genes [ 29].
Data covering costs and charges were included.
HES data covering all NHS hospital admissions in England.
Data covering the application of each therapy were examined.
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