Using dynamic modeling and time-course microarray data, we constructed intracellular PPI networks for primary and secondary infection of zebrafish with C. albicans.
Using the t-cover hitting set results (for t = 1, 2, 3, 4) from 300 microarray data, we constructed a TF-TF relation graph and searched for 3-cliques and 4-cliques in the graph.
Synthetic data constructed from real microarray data can be used to assess a marker identification methodology, with class labels, markers, and interaction models handpicked and treated as ground truth.
Microarray data have been deposited with Array Express [Array Express:E-MEXP-2379] E-MEXP-2379] E-MEXP-2379] E-MEXP-2379]n generation of experimental data, CPnstruconceivedanalyzed the networkstudy drafted the manuscriparticipated
Using obtained NotI-microarray data, we constructed the prediction model for identification of ccRCC in renal biopsies.
H-LC conducted preliminary IGF1 signalling work and protein validation, BG participated in microarray data analysis by constructing the Excel macro for visualisation of data and data mining.
First, we used NSC [ 38], a method originally developed for microarray data analysis, to construct a classifier that performs cancer class prediction from sequencing-based miRNA expression profiling.
Like PCA, PLS reduces the complexity of microarray data analysis by constructing a small number of gene components, which can be used to replace the large number of original gene expression measures.
Note that in general a number of congeneric microarray data are required to construct gene co-expression networks.
The 5480 TFs that actually had expression profiles in the microarray data were used to construct gene regulatory networks.
