Sentence examples for microarray chip data from inspiring English sources

We reprocessed our Affymetrix microarray chip data using Robust Multichip Average (RMA) for further background adjustment and to reduce false positives of our Affymetrix microarray chip [35] [37].

Microarray assessment of saliva exosomes revealed 509 core mRNA transcripts (see supplementary data Table S1) that were common to four different microarray chip data sets (each set was derived from pooled whole saliva samples from six healthy subjects).

Affymetrix Canine_2 microarray chip data were normalized and filtered; we used robust multiarray average (RMA) to obtain mean values for the intensity of the probe pairs and define the expression levels of the mRNA based on modeling perfect match signal intensities and ignoring mismatch signal [46].

To probe transcriptional regulation of the AtSRO gene family, we mined publicly available Affymetrix microarray chip data (see Methods; AtSRO3 and AtSRO4 are not represented on the Affymetrix arrays).

Microarray chip information (from Affymetrix), raw data and results are stored in SoyXpress, and each probe is linked to the sequence information and meta-data.

Other studies utilized a combination of chromatin immunoprecipitation combined with microarray (ChIP-chip) data and expression data [ 12- 16].

In this study, we present a novel methodology for unraveling transcriptional regulatory networks by integrated analysis of microarray, ChIP-chip data and TF motif information.

Data from RNAi [ 15] and chromatin immunoprecipitation coupled with microarray (ChIP-chip) data [ 16, 17] independently validated a statistically highly significant fraction of these regulatory relationships.

Bioinformatic alignments of H4K12ac chromatin immunoprecipitation assay in combination with microarray (ChIP-chip) data [ 11] with sperm methylome [ 18] provided the first overview of H4K12ac association with methylated or unmethylated gene promoters.

To address this issue, chromatin immunoprecipitation microarray (ChIP-chip) data [ 25], which represent the relative binding strengths of TFs to the promoter regions of their target genes, have been used as a substitute of motif scores.

Kumquat microarray chip hybridization data were assessed for overall signal intensity and consistency of the expression ratio over all time points, which resulted in the exclusion of chips with inconsistent results.