Considering the number of putative CDSs predicted and those having been confirmed by extrinsic evidence and/or microarray analysis, GLIMMER seems more powerful than GeneMark and ZCURVE in new CDS prediction.
The analysis seems inconsistent.
The gene expression profiles revealed by qRT-PCR analysis seem to correspond well to the profiles obtained from microarray data (Additional file 2 Figure S2).
In agreement with these observations, the results obtained by microarray analysis indicated that macronutrient metabolism seems to function appropriately in old mice.
Indeed, in the microarray analysis the 3′ end of rps8 mRNA seems not to accumulate to a higher level during ethanol production.
Based on this, it does not seem possible to identify accurately tissue-specific genes from microarray analysis performed on cells grown in culture, as was previously done [ 5- 7].
The present glycomics microarray analysis showed that there are Man and GlcNAc residues at the Paracoccidioides EV surface that seemed to be recognized by the innate immune receptors DC-SIGN and DC-SIGNR, but not dectin-1 or -2.
No microarray analysis of tobacco trichome is available in the public database at present, and the gene expression characteristics of tobacco trichomes seem far from being comprehensively understood.
This method seems to be highly efficient and cost effective in comparison with PCR amplicon sequencing and other conventional methods such as microarray analysis.
performed microarray analysis.
