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Microarray analysis produced expression data for 22746 probe sets (genes) that were entirely used in the rest of the analyses.
Genome-wide SNP genotyping by microarray analysis produced a total of 1753 genotype calls per sample which, after filtering for informative data, provided 1017 SNPs for study.
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J.S.B. performed microarray data analysis, produced the results and drafted the manuscript.
Microarray analysis has produced a greater understanding of the processes and genes underlying the process of cryoprotective dehydration.
As the three microarray analysis methodologies produced unrelated measures of signal intensity, only MAS5.0 signal data were used to define the gene expression clusters.
We took the intersection of genes identified in both the meta-analysis and in-house microarray experiment, and this intersection analysis produced a list of 138 genes, which were used as the feature set for developing the gene signature for recurrence.
Microarray analysis methods produce large sets of gene expression data that can be exploited for novel insights into the fundamentals of molecular biology research.
This study aims to clarify whether DNA microarray analysis and GWAS produce comparable results with respect to RA susceptibility genes.
In support of this, one third of expressed genes were previously found to be differentially regulated when comparing male and female embryos using microarray analysis of bovine blastocysts produced with sexed semen [ 38].
The PA level increases during chilling and cold acclimatization, as well as in response to freezing [ 63, 122], and the results of microarray analysis imply that PA produced from the PLD and PLC/DGK pathways are involved in two different pathways in cold responses [ 62].
Consequently, classic microarray analysis approaches might not produce optimal results, because they tend to discriminate gene expression profiles on the basis of the experimental settings in which they have been produced rather than on the basis of the stimuli they are responding to (for example a drug treatment).
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