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In fact, it is not surprising that the influence of the level of heterotachy on the performance of phylogenetic methods when analysing real data is less important than across-lineage rate variation.
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For this purpose, we considered genes identified by a method when analysing data from each tumour tissue individually.
However, both duplicates were strongly amplified (Ct = 17 and Ct = ∼4) (Figure 3B) corresponding to between a 4×106-fold (ΔCt = 39−17 = 22) and 1×1012-fold (ΔCt = 44−4 = 40) increase in signal, thereby showing the potential of the Amp-PCR method when analysing low copy number samples.
No GSA method consistently outperformed the other, and we recommend using more than one GSA method when analysing gene expression data.
Although measuring TAT is a common method when analysing clinical process times, it is difficult to compare studies, because there are many different definitions in use.
However, only one of these studies was able to consider the possible heterogeneity in the population by using the adequate statistical method (LCGA) when analysing longitudinal data [35, 36].
Usually, the detection method of choice when analysing fructans by HPAEC is pulsed amperometric detection [ 9].
They are increasingly the method of choice when analysing data with a clear hierarchical structure [ 32].
Infecting U87.CD4 cells, a glioblastoma cell line engineered to express both the HIV CD4 receptor and an HIV coreceptor molecule, is the current method of choice when analysing HIV tropism.
The fully conditional specification multiple imputation method 36 was implemented when analysing these covariates.
Furthermore, the difference between both methods becomes significantly more pronounced when analysing the M. smegmatis mass spectrometry proteomic data reported by Wang et al. Mycobacteria present heavy mutational biases, with genomic %GC contents ranging from 57% (Mycobacterium leprae) to 67% (M. smegmatis) that have a strong effect on their CUB.
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