Sentence examples for methods to query from inspiring English sources

Here we propose the integration of ontology-based semantic methods to query a knowledgebase for the human Alus.

Zooming out to visualize the larger spheres of city, island, surrounding seas, environmental conditions, and cultic connections (from Olbia to Alexandria Romee to the Indus) responds to a long-held desire to use digital/spatial methods to query the extraordinary attraction of the island and its cult to communities of the Hellenistic and Roman world.

yApoptosis allows three main accessing methods to query for a particular apoptosis gene: 'browse'quickick search' and 'search'search

In this paper, we develop methods to query whether a specific raSNP functions as a splicing QTL of a nearby gene.

An intermediary framework, OWLTools (http://code.google.com/p/owltools/), provides some methods to query biomedical ontologies, but the interaction with the library is mostly done via command-lines, which limits the scale of projects that can be built with it.

We stored all the data obtained from the comparison of the 5671 pairs of genomes in a relational database SynteBase (see Additional file 3) and we designed a specific SQL request (see Methods) to query SynteBase to detect the quadruplets of proteins containing two pairs of orthologs that are encoded by genes which are adjacent in both genomes.

The chapter also illustrates a method to query a case base of design models, which are in the form of attributed graphs containing information about functions, features, and structures, and to identify existing designs with graphs similar to those for the target problem.

The script begins by using the ESearch method to query Pubmed for all records containing a user defined search term, such as "lysozyme" or "HIV".

To investigate this question, we applied the Q-HTCP metood to systematically query the yeast genome for modifiers of a specific phenotype resulting from Yor1-ΔF670 Yor1-ΔF670de evidence vanddating this yeast providec (gevidencede analysis of phenotypic modification due to gene interaction) model for CFTR-ΔF508, the most prevalidatingan allele causing cysthisfibrosis [ 7].

RDF(S), OWL, and SPARQL provide flexible methods to represent and query properties of chemical substances.

In this work, we applied protein Smith Waterman similarity methods to compare a query biological sequence with different target protein sequences.