Sentence examples for methods significance from inspiring English sources

Only codon 7 was found to be positively selected under the three methods (significance threshold of p = 0.1 for SLAC and FEL algorithms; Bayes factor = 50 for REL).

Differential expression was assessed using two methods: Significance Analysis of Microarrays (SAM) [ 48] and LIMMA [ 46].

Section 'Methods: Significance level correction' presents the different methods of correction of the Type-I error.

Based on statistical methods, significance levels were calculated that describe the overrepresentation of functional categories by a list of genes – the differentially regulated genes in our case.

To calculate differences in the transcript levels, the platform supplies two methods: Significance Analysis of Microarray (SAM) and T-test statistical analysis.

Among the many statistical methods, significance analysis of microarray (SAM) [ 16, 17], empirical Bayes analysis of microarrays (EBAM) [ 18], and empirical Bayes statistics (eBayes) [ 19] are three commonly employed approaches to screen DEGs.

Differences between tests were checked by χ method, significance being set at P<0.05.

The first method, Significance Analysis of Microarrays (SAM) [ 15], identified genes whose expression consistently differed between infected and mock-infected mice over the entire time course.

With the Hochberg method, significance could be declared for both of the primary haemodynamic variables if both had two-sided P ≤ 0.050.

The means of relative expression for each sample were examined using one-way analysis of variance (ANOVA) method (significance at P < 0.05).

Alternatively we have used the Bayesian method Significance Analysis of Microarray (SAM) to estimate the false discovery rate (FDR): 8,370 of the 27,578 CpG sites represented on the microarray were differentially methylated (FDR = 5%).