Sentence examples for methods for sequence from inspiring English sources

These technologies include tools and methods for sequence analysis (nucleotide and protein sequences), rendering of secondary and tertiary structures for these molecules, and protein fold prediction that can lead to rational drug design.

Using sensitive methods for sequence profile analysis and protein structure comparison, we exhaustively surveyed the protein sets from completely sequenced genomes for all occurrences of 21 intracellular small-molecule-binding domains (SMBDs) that are represented in at least two of the three major divisions of life (bacteria, archaea and eukaryotes).

It seems as if CRF has taken over other methods for sequence labeling (information extraction is an application of sequence labeling, where the sequence is a sentence and the labels are the classes of interest that a word can take on) mainly because it solves the label bias problem [4] that other approaches suffer from, including MEMM.

Notably, we observed NFAT binding at the human P2 promoter of HNF4α at position −461 to −450 upstream of the start site of transcription (see Material and Methods for sequence information).

Finally, structure-based methods for sequence engineering [31], [32] may be implemented into this approach to identify replaceable positions and to limit libraries to manageable ensembles, which would allow further optimization of protein stability.

By use of advanced bioinformatics we identified a new HNF4α binding site in the promoter of the INS2 gene at position −245 to −232 upstream of the start site of transcription [see Material and Methods for sequence information and electrophoretic mobility shift (EMSA) assay in Fig. 1D].

He pioneered methods for sequencing the first bacterium, Haemophilus influenzae, and raced the government to a draw in sequencing a draft version of the human genome in June 2000.

Such an approach was out of the question until the development a few years ago of methods for sequencing very large amounts of DNA at low cost.

Methods for sequence-specific detection in double-stranded DNA (dsDNA) are becoming increasingly useful and important as diagnostic and imaging tools.

More recently, advanced methods for sequencing and community profile monitoring have come into use to include also the complex microbiota responsible for biogas production in such studies.

It begins with an overview of laboratory techniques used to create the diagnostic and forensic data, and then describes methods for sequencing, assembling, and analyzing genomic data.