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The different methods differ in the exact formulation of the HMM, and in the inference algorithm that is used to estimate the model parameters.
How much did the different methods differ in the whole-genome analysis, and would the biological conclusions change depending on which method was used?
First of all, the DNA isolation procedure can substantially influence the quantification, since different methods differ in their effectiveness in removing substances that interfere with the PCR reaction.
Different Condorcet methods differ in how they break ties (cycles).
Since different parametric methods differ in their characteristics, real design process needs flexible choice among them to adapt to subsequent optimization procedure.
However, one can see that the data obtained by RBS and AFM methods differ in some respects, the differences being obviously due to different principles of both methods.
The GLM and NRC methods differ in three ways that result from the different assumptions about neural responses made by each of the two methods.
The methods differ in their treatment of the time discretisation.
The synthesis methods differ in handling this requirement.
Existing methods differ in the protein sequence representation techniques and classification algorithms adopted.
However, the trends of the two methods differ in direction and quantity.
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