Two alternatives can be followed, which correspond to the use of X-Pol as a multilevel quantum chemical method, as exemplified by the examples to be presented in section 3.1, or as a quantum mechanical force field that introduces empirical energy terms, as in section 3.2.
The range of possible ranks varies in principle with the method chosen (as exemplified by France whose rank based on the harmonic mean lies outside of the given range).
Three areas were obtained for each method and biofilm experiment as exemplified in Figures 3B, C and D only for the glass support, from which the final average area was calculated.
However, a drawback to including specific testing methods is that it may be more difficult to adopt new methods as they become available, as exemplified by the current debate (e.g., ECHA 2011b) over the legality of replacing the two-generation reproductive toxicity test (OECD TG 416) with the new extended one-generation test (OECD TG 443) that reduces the number of animals used by half.
In hindsight, the score dissection concept can benefit the supposedly less sensitive sequence-to-profile search method by outperforming the more superior profile-to-profile search method (e.g. HHsearch) as exemplified by dissectHMMER.
Routing protocols use two basic methods to measure connectivity across internetworks, as exemplified by the routing information protocol (RIP) and open shortest path first (OSPF) protocols.
Inhofe's sense of the scientific method refutes the need for such extravagance, as exemplified by the priceless moment he rebutted global warming by throwing a snowball on the Senate floor.
Rational thought, balanced and unbiased evaluation, and honest reporting, as exemplified by the scientific method, are the primary underpinnings of the trust with which the nonscientific community honors us.
Positional analysis, as exemplified by the threshold method, has predominated since the introduction of real-time PCR over 15 years ago [ 35], and is the quantitative methodology upon which all commercial platforms currently rely.
This implies that for data sets which are expected to contain both reads with indels and reads with mutations, a hybrid approach might be the most sensible option, as exemplified by our hybrid method.
