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(E) Multiple sample similarity phylogenetic tree was built by Unweighted pair group method with arithmetic mean.
Beta diversity between samples was estimated with the Bray Curtis dissimilarity index and then represented using an UPGMA (unweighted pair group method with arithmetic mean) clustering.
And principal coordinate analysis (PCoA), Anosim Analysis, and unweighted pair group method with arithmetic mean (UPGMA) were performed using QIIME for beta-diversity analysis.
unweighted pair group method with arithmetic mean.
Unweighted pair group method with arithmetic mean algorithm.
Cluster analysis using unweighted pair group method with arithmetic mean (UPGMA) was shown in Fig. 2.
The hierarchical clustering analysis was performed using unweighted pair group method with arithmetic mean.
Cluster analysis using unweighted pair-group method with arithmetic mean (UPGMA) was performed in SPSS 15.0.
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These values were used to construct a dendrogram using Unweighted Pair Group Method with Arithmetic averages (UPGMA).
And then the average linkage method, Unweighted Pair Group Method with Arithmetic mean (UPGMA), was adopted for the tree construction.
A phylogenetic tree was reconstructed by the Unweighted Pair Group Method with Arithmetic Mean (UPGMA) method.
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