Namely, the requires method, which returns upstream tasks of the current task; the output method, which returns all the outputs of the current task; and the run method, which defines what the task does.
The centroid calculation is the most popular defuzzification method which returns the center of the area under the curve.
To do so, we use the fspecial ('gaussian', hsize, σ) method which returns a rotationally symmetric Gaussian lowpass filter of size hsize with standard deviation σ.
The OntologyTerm class supports this by implementing a getXrefs method which returns cross references themselves as OntologyTerms, along with a predicate, defined in libSBML, that indicates the relationship between them.
Specifically, if a protein contains two binding sites, then Top-1 reporting is clearly insufficient in distinguishing methods which returned a correctly identified pocket in the first position of their result set but differ in the second position.
The optimization process relied on a genetic algorithm and the selection of the best mixtures, on a non-dominated sorting method (NDS), which returned Pareto fronts gathering the best solutions.
You can check this using the Activity Starter method ResolveActivity, which returns the name of the Activity that would be started, given the package or intent information you've provided.
First, the startTime variable is initialized by invoking the task t's getEarliestStartTime method (line 5), which returns the time that task t can start to execute while considering any precedence relationships that t has.
It's simple class which has a method class called Get which returns the contact string.
A simple wrapper method, getChebiEntity id) is provided, which returns a Java uk.ac.manchester.ChebiEntity object.
