In addition, we describe a novel method to use literature derived functional cohesion to determine the threshold for expression p-value and FDR cutoffs in microarray analysis.
Although it is not within the scope of this paper to assess the contribution of this method to the literature on community engagement, we aim to illustrate this contribution in supporting policy decision making in research.
To provide a method to evaluate this literature, a literature search was conducted in spring 2015 to identify economic evaluations published in the Journal of Thoracic Oncology.
Therefore, we developed a semi-automated method to scan the literature exhaustively and to try to construct as complete a picture of the NR dimerisation network as possible.
As described for our earlier review, we attempted to address these limitations by using multiple methods to source literature including surveying a broad network of experts in the field about unpublished studies.
The method is compared to literature data, showing accurate and oscillation free solutions.
We have presented intra comparisons for static and dynamic features separately and the proposed method also compared to literature work in Table 5 under Sect. 5.
A number of other groups have developed methods to determine literature-based functional coherence of gene/protein sets [9], [10], [12], [13], [17].
