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Invalid type and method terms were replaced with valid PSI-MI defined terms after manual confirmation.
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Multiple testing correction was done using the Benjamini method, and enriched GO terms were considered significant for q-values < 0.05.
Exact and partial word tokens building the original method term lists were also exploited too.
In this method, only instantaneous terms are used, thereby avoiding the computation of distributed terms.
In this method, non-convex terms are replaced with local linearizations.
Moreover, diagnostic methods and prognostic terms are found frequently in these abstracts.
Many methods for clustering terms are based on predicating whether two terms are mapped to the same concept or not.
A simple method of trimming DO terms is to select the DO terms at a certain level in the DAG.
The novel calculation method termed wPLL was preferable.
However, when comparing the first 10 terms identified using both enrichment methods, common GO term were found corresponding to the biological processes of adventitious root development (Table 3).
In the current implementation, identities of gene terms are identified by using a collective entity disambiguation method, whereas disease terms are recognized through a list of vocabularies.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com