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Each interaction detection method is annotated with its Ontology Term (e.g. MI:0018).
The amplicon produced by the QT-EVE-OS-002 method is annotated in the database with one mismatch in the probe, as also pointed out by the JRC GMO-Matrix.
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58 Four out of the five genes (P-value ≤ 3e-15) (ARG5,6/YER069W, ARG8/YOL140WW, ARG8/YOL140W, CPA1/YOR303W) that we identified using our method were annotated as being involved in "arginine biosynthetic process".
Peaks sets identified by different methods were annotated using TFBSs (see materials and methods).
The remaining ORFs that were not annotated by the above methods were annotated to best-hit homologs with an identity of ≥40% and marked as non-orthologs.
Of the total 6,996 such probes, 1,306 giving positive signals under high stringency (see Materials and Methods) were annotated using the Blast2GO tool [ 42].
In our method, each gene is annotated with multiple categories.
Reverse is annotated by Fries.
In this method probes are annotated using up-to-date databases and assigned to unique gene identifiers, in this case Entrez ID's, instead of the 'classic' GeneChip probe sets.
Popular text detection datasets such as the International Conference on Document Analysis and Recognition (ICDAR) 2003 dataset [15] and ICDAR 2011 dataset [16] are inappropriate for evaluating our method since they are annotated with word rectangles.
Each of the themes from the definition by De Mauro et al. (information, methods, technology, impact) was annotated more often than any other (apart from Application).
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