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The ChIP on chip method combines chromatin immunoprecipitation (ChIP) with hybridization on DNA microarrays (chip).
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Method combining chromatin immunoprecipitation and next-generation sequencing that analyses the genome-wide DNA binding sites for transcription factors or other chromatin-associated proteins.
To identify the target genes of TREX-2 on a genome-wide scale we performed chromatin immunoprecipitation-exonuclease (ChIP-exo) assays, a high-resolution method that combines chromatin immunoprecipitation (ChIP) with lambda exonuclease digestion followed by high-throughput sequencing (Rhee and Pugh, 2011).
The ChIP-on-chip technique combines chromatin immunoprecipitation (the ChIP) with DNA microarray technology (the chip).
(43) developed a quantitative telomeric chromatin isolation protocol (QTIP) that combines chromatin isolation with the stable isotope labeling by amino acids in cell culture (SILAC) methodology (43).
Chromatin immunoprecipitation-sequencing (ChIP-seq) combines chromatin immunoprecipitation of a DNA-binding protein with high-throughput DNA sequencing and mapping of the 'sequence tags' to a reference genome.
ChIP-chip (sometimes referred to as ChIP-on-chip) and ChIP-seq are widely-used genomic methods that combine chromatin immunoprecipitation (ChIP) with microarrays and deep sequencing, respectively, to map protein-DNA interactions in vivo[ 1].
The Fix-Sort-ChIP method combines fixation for chromatin immunoprecipitation and cell cycle specific flow sorting techniques, and is based on previously published methods [49], but the complete procedure is provided here for clarity.
This method combines in situ DNase I digestion of bacterial genomic DNA with a modified ChIP-chip method (ChAP-chip, Chromatin Affinity Precipitation-chip) we previously developed.
One method combines several types of cells with genetic engineering.
This method combines scoping review and meta-review methods.
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