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The core promoter regions were partitioned into 1,445 that contained CpG islands and 1,570 that did not according to the method and threshold used in Zhao et al [21].
The same method and threshold were used to identify strong genetic interactions within individual complexes.
To identify differentially methylated CpGs in iPSCs, we used a well-accepted method and threshold [ 27, 28].
Although exact success rates varied somewhat depending on the specific classification method and threshold, the global pattern was consistent, with 22% more participants classified as guilty when cooperating than when suppressing their crime memories, averaged across experiments, measures and thresholds.
QTL detection depends on many factors including but not limited to: population size, marker density of the linkage map, the accuracy and precision of phenotypic characterization, environment, and the method and threshold of detection.
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Segmentation was realised by applying edge detection method and thresholding.
Next, we analyzed the expression profiles using the same statistical method and thresholds, for altered gene expression between the NAFs and CAFs.
However, the quantitation method and thresholds identified in the current experiment may represent an adjunctive feature in assessment of stromal invasion in squamous neoplasia.
The concordance of our raw data with the raw data from the lower-resolution study, along with the utility of our data in the identification of genes previously characterized as containing cryptic transcripts, provides support for our experimental design, analysis methods, and threshold selections.
Two different methods, namely "single-threshold method" and "double-threshold method" for timing measurement, were studied.
Statistical analyses were obtained using the 2-Delta-delta-Cycle Threshold values (Delta-delta-CTs) method and the Threshold was determined automatically by means of SDS Enterprise Edition software (Life Technologies-Applied Biosystems).
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