For this test, the Maq analysis method above was used, but without the requirement for multiple read support of predicted SNPs.
To identify the bridge nodes based on the betweenness, we adopted the method above used to determine hubs.
Follow the instructions in the Soldering Gun method above, using the plugpack in place of the soldering gun.
Most of the methods presented above used several genome information, such as the sequence similarity, the genomic function, or the genomic structure.
The method above can be used to calculate the maximum host diversity for the case in which all strains support phage.
In group C, both methods above were used.
Generally speaking, using the method above can only change your IP to a new one in the same network segment.
Copies of each locus were extracted from the genomes using the methods above were aligned using the HMMER program hmmalign.
The method outlined above uses software freely available or included with Windows.
We employed 10-fold cross validation and all the four methods above use the same groups of training and test set for fair evaluation.
