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Raw sequence data and metadata were retrieved from the HMP Data Analysis and Coordination Center (HMPDACC) (http://www.hmpdacc.org/).hmpdacc.org/
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Metadata is retrieved first from the external database, so that study design modeling can begin immediately.
Three pistols were retrieved from the scene.
Similar samples were retrieved from control animals.
Initial TSSs were retrieved from Ensembl.
PPIs were retrieved from the HPRD [4].
The metadata of the nucleotide and protein resources were downloaded from the BioProject database as GenPept files, whereas the sequences as aggregated under the BioProject PRJNA257197 (9) were retrieved from GenBank in the FASTA format.
Annotations were retrieved from phytozome.
Sequences were retrieved from [51-54] [51-54]
Mass spectra, MASCOT and associated metadata can be retrieved from the PRIDEdatabase; http://www.ebi.ac.uk/pride/.ac.uk/pride/
The resulting loaded metadata can be retrieved from the caDSR APIs or viewed interactively with the CDE Browser web application.
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