Sentence examples for metabolic reactions based from inspiring English sources
Genomic-scale networks of metabolic reactions based on stoichiometry, thermodynamics and other physico-chemical constraints that emulate microbial metabolism have been developed into valuable research tools in metabolic engineering and other fields.
By controlling the simultaneous on/off activity (C on/off ) and flux scale (C scale ) of the metabolic reactions, based on FBA with GR constraints, the flux distributions in gene knockout mutants were accurately predicted [ 28].
A number of researchers have explored the idea of predicting metabolic reactions based on an analysis of the basic biochemical transformations performed by enzymes (Hatzimanikatis et al., 2005; Li et al., 2004).
It is relatively easy to describe the rate of a metabolic reaction based on Hill kinetics if its inhibitors are known.
A GEM maps annotated metabolic genes and proteins to reactions based on the current best understanding of a given organism.
Thus, the motorcycle DB makes it possible to predict enzyme reactions based on the class and subclass of metabolic reactions evidenced by experiments mentioned in scientific literature.
The initial metabolic network of R. eutropha H16 was constructed by compiling all the enzymatic reactions based on the KEGG database [ 8].
The directionalities or reversibility of all metabolic reactions were defined based on thermodynamics, therefore, there exist 266 reversible and 741 irreversible enzymatic reactions in the model of iYL_2.0.
By constructing a reaction based graph of the metabolic network, we have elucidated specific reactions involving pyruvate that form the centre of the E. coli metabolome.
We represent the metabolic networks of these organisms in the form of a reaction based graph with the biochemical reactions as the nodes and an edge existing between the nodes if they share at least one metabolite.
The core of the stoichiometric metabolic model is a list of metabolic reactions occurring in C. thermocellum, compiled based on evidence from genome annotations and experimental observations.
