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Knowledge of the metabolic pathways used by anaerobic bacteria to break down hydrocarbons has allowed us to identify unique intermediate compounds that can be used as biomarkers for in situ activity.
Analysis of the Sulfobacillus genomes illuminates metabolic pathways used in various transformations of carbon, nitrogen, and sulfur metabolism (summarized Figure 5 and Additional file 5: Table S2).
And the bacterium's fatty acid pathway is more efficient at turning feedstocks into fuel than metabolic pathways used by other synthetic biology companies.
Shown in Table 2. is the distribution of the unigenes into general metabolic pathways used by KEGG.
The metabolic pathways used are those of the Kyoto Encyclopedia of Genes and Genomes (KEGG) [ 46].
The metabolic pathways used by tsetse combine standard pathways used by most organisms with pathways specific to tsetse.
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To test how gene duplication and associated gene expression variation may shape Arabidopsis metabolism, I focused on transcripts associated with specific metabolic pathways using the AraCyc databases predictions [20], [21].
We used the metabolic and transcriptomic signatures to identify deregulated metabolic pathways using Paintomics50.
New metabolic pathways using different transition metals co-evolved alongside changing redox conditions.
To visually illustrate the transcriptional dynamics during cell wall development in the elongating internode, DEGs were categorized into the metabolic pathways using the MapMan45, 46.
Out of these, 197 genes could be associated with different metabolic pathways using the RiceCYC 1.2.
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