For example, in the liver coordinated circadian expression of genes encoding components of sugar, lipid, cholesterol and xenobiotic metabolic pathways were reported [86] [88].
Multiple cases of non-orthologous displacements of TFs that control specific metabolic pathways were reported.
Across both studies, a total of 15 differentially abundant biochemicals representing several different metabolic pathways were reported in common (Fig. 5).
Complete information about the network change patterns and classes of metabolic pathways are reported in supplementary table S2, Supplementary Material online.
A schematic representation of the features of the metabolic pathways is reported in Figure 8. Cucumber seeds (Cucumis sativus L. cv Marketmore '76, F.lli Ingegnoli, Milano) were surface sterilized and sown in Agriperlite, watered with 0.1 mM CaSO4, allowed to germinate in the dark at 26°C for 3 d, and then transferred to a complete nutrient solution with 0.1 mM Fe(III -EDTA.
A network map of defense-related metabolic pathways was generated based on the biochemical pathways reported at the Gramene website (http://www.gramene.org/; Fig. 2).
In this context, the characterization of M. tuberculosis phosphoribosylpyrophosphate synthetase, which is the enzyme catalysing the second step of this metabolic pathway, is reported.
Based on our results, we discuss possible relationships between expressed sequences and structures and/or biological processes occurring in animals and/or plants and B. emersonii, including a metabolic pathway previously reported only in animals and bacteria.
Currently, three glycerol metabolic pathways have been reported [24], one phosphorylative pathway [25], [26] and two oxidative pathways that are based on NAD(P +-dependent glycerol dehydrogenases [27].
Interestingly, gene clusters for metabolic pathways have been reported also in plants (reviewed in [ 54]).
