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The metabolic pathways generated through the use of KAAS pathway mapping were largely correlated with essential metabolisms such as galactose, amino sugar, nucleotide sugar metabolisms and photosynthesis confirming the constitutive status of the majority of the cDNAs obtained.
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Carbon rerouting is marked by a switch from metabolic pathways generating energy and biosynthetic precursors in growing bacilli to pathways for storage compound synthesis during growth arrest [ 36].
Number of up and down-regulated genes in leaves of 18-day-old rice seedlings (Oryza sativa ssp. japonica cv. Nipponbare) after four days of iron excess exposure, and its respective metabolic pathway generated by Kegg (Kyoto Encyclopedia of Genes and Genomes).
The urea/ornithine cycle is an important metabolic pathway generating valuable intermediary metabolites for the growing fetus.
The TCA cycle is a central metabolic pathway, generating ATP and NADH under aerobic conditions and also producing precursors for many compounds including some amino acids.
A network map of defense-related metabolic pathways was generated based on the biochemical pathways reported at the Gramene website (http://www.gramene.org/; Fig. 2).
The lumped biochemical reactions in the metabolic pathways are generated by stoichiometrically coupling several sequential elementary reactions.
Heat map representation of metabolic pathways was generated using the Mayday visualization tool version 2.12.
KEGG maps for more than 130 metabolic pathways were generated with the KEGG extension of Blast2GO.
According to the KO assignment, metabolic pathways were generated with tools supplied by KEGG [ 31].
In total, KEGG maps for more than 160 metabolic pathways were generated.
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