Sentence examples for metabolic network including from inspiring English sources

A metabolic map of breast cancer was constructed by visualizing the metabolite changes in the metabolic network including pathways like glycolysis, TCA cycle, nucleotide metabolism and catabolism of amino acids.

Three metabolic checkpoints in the proposed metabolic network, including xylulose kinase, acyl-CoA dehydrogenase, and dihydrolipoyl dehydrogenase reveal new possibilities in developing genetic and metabolic engineering microalgae for desirable lipid productivity.

Our understanding of the biological functions involved would benefit greatly from an understanding of the metabolic network, including quantitative measurements of different types of compounds (such as proteins and metabolites) and various biochemical processes (such as gene expression) made in parallel, and preferably combined with other classical phenotypic analyses [8].

Vertices are optimal paths of the metabolic network, including reactions with fixed and variable fluxes.

FBA requires as input a metabolic network including stoichiometric coefficients plus an objective function to constrain the number of solutions.

The developed metabolic network, including the constrained substrate uptake rates, is available in SBML format (see Additional file 3).

Its central metabolic network includes formaldehyde metabolism, serine cycle, citric acid cycle, pentose phosphate pathway, gluconeogensis, PHB synthesis and acetyl-CoA conversion pathway, respiration and energy metabolism.

Finally, a reconstruction of the A. niger metabolic network includes 871 genes [ 18].

The reconstructed metabolic network included 676 unique biochemical reactions (551 cytosolic, 103 mitochondrial, 5 glyoxysomal, and 17 extracellular) and 113 unique transport processes.

In addition, the reconstructed metabolic network included transport steps between the different intracellular compartments and between the cell and the environment.

From the annotation publicly available, our metabolic network includes 882 metabolic reactions and 790 metabolites, as well as the information from 669 genes that have some relationship with the metabolic reactions.