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The collected information was merged and evaluated by using the Perl programming language (http://www.perl.org/, last accessed June 25 , 2014.
These data are analyzed via established and newly developed SV discovery tools and then merged and evaluated within Parliament, a SV detection infrastructure designed for multiple data sources and discovery methods.
Therefore the Mascot DAT files were first converted to mzXML, merged and evaluated on the peptide level with the built-in PeptideProphet tool.
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In summary, the idea of using (whatever form of) overlap for merging and evaluating calls is statistically unsound and introduces severe, misleading biases when merging calls.
To represent a common methodology for enabling comparison between interdisciplines, the different approaches to validation have to be merged, analysed, and evaluated.
Let the merging criterion be that the breakpoints of two calls do not deviate by more than L basepairs (see "Note on reciprocal overlap" below, why reciprocal overlap is not a statistically sound criterion, hence should be avoided when merging, and also evaluating calls).
The design onramp weaving length is examined and evaluated with various foreseeable merging scenarios and physical examples.
To evaluate the association between the occurrence of HFSR and survival times, OS, DFS- and PFS data of both trials were merged and analysed together.
For the purpose of comparison, we have merged the mix and uncertain classes into our class Neutral and evaluated the hashtag classifier on our manually labeled dataset.
Patients from two multicenter epidemiological studies on sepsis were merged to evaluate, in a retrospective manner, the association between levels of endogenous immunoglobulins in plasma and mortality depending on disease severity at ICU admission.
In previous tests, the potential advantage of data merging was evaluated by means of a quantitative rate of correct classification or validation of previous results.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com