Sentence examples similar to mer distribution from inspiring English sources

Using a K-mer distribution analysis, we estimated that quinoa has a genome size of apporoximately 1.45 Gbp (Supplementary information, Figure S1), which is consistent with previous estimates based on C-values14.

Distribution of all 64 trinucleotides (3-mers) was determined, and the 3-mer distribution in 1,000-bp 1,000-bpthat overlapped by half their length (500 bp) across the genome windowsputhat[39].

Thus, we can estimate the 5-mer distribution, instead of 4-mer distribution used in MetaCluster 4.0, to get a better binning result.

Thus, the 4-mer distribution, instead of 5-mer distribution used in the first round, is estimated based on each virtual contig for binning.

4-mer distribution analysis of gene mapped metagenomic sequences of serially diluted gut microbiota.

We furthermore demonstrate that k-mer distribution is associated with the quality of the metagenomic data.

Both tools use hash tables to compute the k-mer distribution for a given (fixed) k.

4-mer distribution analysis of barcode-cassette filtered metagenomic sequences of serially diluted gut microbiota.

The 5-mer distribution of each virtual contig is estimated and the virtual contigs are grouped using K-means clustering method based on the Spearman distance of the 5-mer distribution [Observation (C)].

Similar results were obtained using 4-mer or 6-mer distribution patterns (Additional file 1: Figure S14).

This way, longer contigs can provide the required k-mer distribution information, which will allow effective binning and taxonomic assignment.