Sentence examples for membrane topology analysis from inspiring English sources

Membrane topology analysis using HMMTOP showed that many of the peptides assigned to membrane proteins were located on the exterior of the cell membrane (Fig. 3B).

AH carried out the membrane topology predictions, phylogenetic analysis, domain assignments, RNAi studies and analysis of gene expression in the transgenic worm strains.

ES participated in the membrane topology predictions, phylogenetic analysis and domain assignments.

An analysis of the membrane topology of subunit N from E. coli was recently reported [22] that supports a 14 transmembrane helix model.

For the analysis of the membrane topology we focused on vertebrate anoctamins.

Later this approach was used to determine the topology of 37 Saccharomyces cerevisiae membrane proteins (Kim et al., 2003), global topology analysis of Escherichia coli (Daley et al., 2005) and yeast (Kim et al., 2006) genomes and to improve the prediction accuracy by domain assignments (Bernsel and von Heijne, 2005).

Analysis of hydrophobic domains was conducted for membrane protein secondary structure prediction by the SPLIT program [ 28] and for topology analysis with Topcons program, which combines results of several predictors to yield a more reliable result [ 31].

A hydropathic analysis of hDATΔEX6 revealed 11 putative transmembrane domains (TMDs), suggesting a membrane topology different from that of FL hDAT.

Analysis of the MCMJR1 sequence using several membrane protein topology prediction softwares postulated a multispanning membrane topology with eight predicted TMDs.

The determinant for the membrane topology is unknown.

We have extensively characterized the composition and membrane topology of rat ZG proteins.