Suggestions(2)
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In addition, a confidence map is presented based on cluster membership derived from cluster distance in attribute space.
For the microsatellite stable tumors, geographical origin of the patients correlated with cluster membership, derived from unsupervised hierarchical cluster analysis (p = 0.001).
To remove the effect of population structure, we regressed the two phenotypic traits on estimates of cluster membership derived from replicate runs of Structure (that is, the Q matrix from Structure).
Similar(57)
Additional file 1 includes the list of these CAD gene names based on the standard established by the International Populus Genome Consortium (IPGC)[ 35] with the names of species (Poptr for Populus trichocarpa for example), the protein name (CAD), and a designation of family and clade memberships derived from this study.
It specifies that their membership derives from their residence within borders.
Class membership was derived from the optimal latent class model.
Our method is based on fuzzy membership functions derived from GIS analysis.
The average symmetric similarity coefficient H' among runs and the average matrix of ancestry membership proportions, derived from the 20 runs, were calculated with CLUMPP v1 [ 50].
Fuzzy memberships were derived from the landslide frequency ratio values.
The lda function has two working modes: one having the parameter CV = False (the default), implying no application of cross-validation methods, meaning it can obtain an object that includes discriminant scores, and the other with CV = True, where predictions of class memberships are derived from leave-one-out (LOO) cross-validation.
Fuzzy membership values were derived from landslide frequency ratio.
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