Sentence examples for member sequence from inspiring English sources

CUSP examines a domain superfamily alignment and internally maps DSSP and PSA scores to each member sequence.

For each member sequence of a pfam-domain query (reduced-redundancy alignment), PSI-BLAST was to scan the predicted proteome panel.

For each Pfam domain, we find the EC assignments (if any) for each member sequence.

For example, when a member sequence and the consensus sequence disagree at two sites, the presence of the member sequence is documented by introducing two cluster-induced SAPs at the two sites of the consensus sequence.

The originally annotated SAPs and PTMs of the member sequence are also merged into those of the consensus sequence.

Multiple NarJ subfamily member sequence alignments and their corresponding nucleotide codon alignments were used to identify regions of residue conservation.

Community sequence reads that were predicted to contain fragments of genes (environmental gene tags, EGTs) were subsequently classified on different taxonomic ranks based on a phylogenetic tree of the metagenomic read itself and the matching Pfam protein family member sequences.

Alignments of family member sequences with reference sequences were conducted in a step-wise fashion.

Thus, in some instances the "consensus sequence" may not be most representative of member sequences.

Thirdly, the shapes of the predicted secondary structures of member sequences were also limited.

To determine edges, the vertices are first ordered along each of the member sequences.