Sentence examples for medium stringency setting from inspiring English sources

CILIOGENESIS was tested for enrichment of GO FAT, KEGG, and Reactome pathway categories using the medium stringency setting of DAVID.

At the medium stringency setting, whereby the length of the read required to match was increased from 50%to70%0%, the number of mapped reads dropped by roughly half for the PGM and by roughly 10% for the MiSeq.

We used the highest stringency setting to detect significantly enriched annotation clusters with P < 0.05 and FDR < 0.25.

The annotations have been selected based on medium stringency (default) setting, with > 2-fold enrichment and Benjamini-Hochberg p-value < 0.05.

On the other hand, for the high stringency set we accepted only 1 median false positive.

Annotation clustering was performed with stringency set to "high".

Parameters for the assembly were set to high stringency: vector scanning, 32bp trimming of all 5' ends, minimum Phred score of 20, minimum length of matching word increased to 30, and level of contigs merging stringency set to the highest.

The high-stringency setting corresponded to setting the minimum match percentage to 90%.

The high-stringency setting corresponded to a minimum match percentage of 93%, and we retained contigs comprising ≥200 reads.

The DAVID annotation clustering module [ 25, 26] set at medium stringency (default level) was used to classify differentially expressed G. nigrifrons transcripts into functional groups.

The transformed colonies were replica plated on –Leu –Trp -His (medium stringency) plate to determine the interaction, if there is any, between the proteins.