Sentence examples for medium marker density from inspiring English sources

Under a medium LD level and medium marker density as size of reference samples increased from 90 to 540, for example, the running time for MACH, IMPUTE, fastPHASE, PLINK and Beagle increased from 0.6 min to 15.5 min, from 0.50 min to 13.2 min, from 1.6 min to 6.5 min, from 0.15 min to 0.2 min and from 0.6 min to 0.7 min, respectively.

Using the same simulated data as described previously, we focused on five scenarios, all at the medium marker density (selecting every 4th marker).

In summary, the 50 K chip was used for a medium marker density scan of the sheep genome to identify regions that influence traits related to resistance to GIN infections in adult animals.

For v at the high marker density (r = 0.32), UNIMH had higher ESS/CPU than BIVMH (P < 0.05), whereas for s at the medium marker density (r = 0.24), median ESS/CPU was higher for BIVMH than UNIMH (P < 0.05).

We have found outsourcing SNP genotyping to commercial service providers an economical and convenient option, with the most commonly used platform for low to medium marker density being the uniplex assay of Kbioscience http://www.kbioscience.co.uk.co.uk

However, using a high or medium high marker density in an F2 population provides only a moderate improvement in the resolution because the population has undergone only one generation of recombination [ 5].

To investigate the effect of high, medium, and low marker density, we considered distances between two adjacent markers of 1 cM, 2 cM, or 5 cM (md = 1, 2, 5).

Two microsatellite-based genetic maps with medium to high marker densities were recently developed for rainbow trout by INRA [ 13] and the NCCCWA [ 16].

In our study, the medium-density map had a marker density of 1.30 cM.

The marker density used in the present study (861 markers with MAF ≥ 0.10) appeared adequate for medium-density genome-wide scans, as shown by the medium to high overall R values obtained by fitting the multiple-QTL model with all the highly significant QTL effects [ 58].

The average marker density was 5.6 SNP markers per cM or 3.3 SNP markers per recombination point.