Sentence examples for median transcript lengths from inspiring English sources

Based on the 99 complete CDSs available in GenBank, the mean and median transcript lengths were practically the same (1278 bp; Table 4).

N50, mean, and median transcript lengths were largely comparable across species; however, they were lowest for V. subterranea, for which the smallest number of reads was obtained (Fig. 1B).

As some of these might be due to fragmentary gene models, we excluded models from the analysis that are significantly shorter than the median transcript lengths of non-Physcomitrella cluster members.

The median transcript length for the de novo fragments was 303 bp, with a median ORF length of 98 amino acids, and a median ORF coverage of 99%.

The median transcript length for each method was taken as the point at which half of the integrated area was achieved.

The median transcript length increased from 987 (V1.2) to 1248 bases (V1.6) which can be explained by a higher percentage of annotated UTR regions in this release.

for genes that encoded multiple alternative transcripts, we divided by the median transcript length; our results did not change if instead we divided by the shortest, the longest, or a randomly chosen transcript length.

First, commonly used quality parameters were measured: the median transcript length (N50), defined as the length of the longest sequence such that the sum of the lengths of sequences equal or longer is equal or greater to half the length of all assembled sequences, number of transcripts, and average transcript length.

The transcript lengths had a median of 380 bp and a mean of 992 bp (standard deviation = 1363 bp), and ranged between 201 bp and 24,848 bp (Additional file 1 shows the length distribution of assembled transcripts).

To investigate transcript characteristics in the genes most affected, we compared transcript lengths (taken as the median cDNA length for each gene) between the different groups.

Transcript lengths vary from 333 to 4,100 nucleotides and the average 5' UTR length is 119 nucleotides with a median of 110 nucleotides.