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Differences between structures of the STALK and AURORA were estimated by calculating RMSD (root median square deviation) using the Swiss-Pdb Viewer 4.0 software [ 73].
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Also, to validate the models, some validation indicators, including mean error (ME), mean square error (MSE), mean square deviations ratio (MSDR), median square deviations ratio (MeSDR) and relative mean absolute error (RMAE) were applied and evaluated.
RMSD, root mean square deviation of atomic position.
The deviation between two structures can be evaluated by the root mean square deviation (RMSD).
The root mean square deviation (rms) between TOF monthly median measurements and TOF monthly median predictions and the differences (DP) between the length of the median and predicted ray path have been calculated.
The root mean square deviation was less than 0.02.
root mean square deviation.
Normalized root mean square deviation.
Root mean square deviation normalized.
RMSD: Root mean square deviation; PDB: Protein Data Bank.
With a backbone root mean square deviation (r.m.s.d).
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