Sentence examples for median sequence identity from inspiring English sources

For Biological Process and Molecular Function, the median sequence identity in Bin 10 is about 0.6, and for Cellular Component, the median sequence identity of gene pairs in Bin 10 is about 0.4.

This left 408 pairs of proteins ranging from 0 to 100% identity, with a median sequence identity of 14%.

Selection coefficients were computed from the median sequence identity of each bin (e.g. 0.983 for most conserved class) by solving equation (1) in the Results Section.

The net impact of applying Prodigal and our comparative genomics approach to refine Burkholderia gene maps boosted the median sequence identity for ortholog sets from 71.4% to 74.5%.

In our diverse RPD2 protein set, the median sequence identity for the top 100 homologs was 53%, much higher than the target identity range for BLOSUM62.

All Oct4-associated proteins were found to be highly conserved, with a median sequence identity of 94%, compared to 77% genomic median.

For each pair of families the median sequence identities and similarities were calculated.

An all-against-all comparison of representative sequences from all Bet v 1-related families yielded median sequence identities below 15% and median similarities below 20% for most pairs of families (data not shown).

SSU rRNA variation supported a similar conclusion: the average sequence identity of SAR11 16S rRNA fragments from the Sargasso Sea metagenomic data to HTCC1062 is 96.0% ± 2.8% (sd), with a median of 96.9% (n = 379).

An average sequence identity was calculated for the remaining sequences.

The mean sequence identity is 24%.