Sentence examples for median sequence depth from inspiring English sources

Considering that the 10-5 map was constructed from genotyping a relatively small population (Table 1) at a low median sequence depth of 2.7× (Neves et al. 2014), marker order reversals in the 10-5 map were likely attributable to genotyping or mapping errors instead of cytological rearrangements (Maleipaard et al. 1997).

In total, 42,724 SNPs were identified with a median sequencing depth of 33×.

The mean (median) sequencing depth per SNP locus was 11 (6), with mean (median) proportion "missingness" per SNP locus of 0.18 (0.18).

Gene expressions in both blood and lung tissues were assessed by RNA sequencing with median sequencing depth of 82.1 million mapped reads per sample.

The median sequencing depth of all eight samples varied from 4,832 to 11,531 and at least 99.5 % of all the nucleotides had >1,000 fold sequencing depth (Supplementary Table 3).

This is not a result of IgG datasets having been sequenced much more deeply than the other two groups; in fact, the median sequencing depth of IgG controls is lower.

Gene list results were filtered for genes with a median sequencing depth of 2X in at least one of the two samples compared (i.e. control or treatment) and a log2-fold change of ≥ 1 or ≤ -1.

Of the 26,466 annotated gene models detected in the present study with median sequencing depth of greater than zero (i.e. read counts for a gene were 0 for at most 1 run), 2,971 were expressed at a median read depth of less than 2X but greater than 0.5X in at least one tissue/treatment combination (data not shown).

The average sequence depth was 52, 196 and 69.

Average sequencing depth ranged between 58 and 71.

The average sequencing depth ranged from 117 to 573.