Sentence examples for median polish function from inspiring English sources

The normalized data are background-adjusted, and probe values are summarized per probe set using a median polish function.

Each probe set was then summarized using the median polish procedure as described in Irizarry et al. [28].

After normalization, the treated samples expression values were calculated by median polish procedure.

B-Score method uses the median polish procedure to remove the row/column biases in a plate.

Their joint expression was estimated using a standard additive model fitted by Tuckey's median polish procedure.

The normalized probe intensities were summarized into gene expression levels by using an additive model fitted by the median polish procedure [ 76, 77].

Finally, fitting a robust linear model using Tukey's median polish procedure [ 56] was done to convert probe intensities to the expression levels of probesets.

The RMA method [19] consists of three steps: background adjustment, quantile normalization [20], and probe set summarization of the log-normalized data applying a median polishing procedure.

Array data were background corrected by robust multi-array average, quantiles-normalized and summarized by median polish using the expresso function (Affy package).

A robust median-polish procedure was used to combine measurements from multiple probes into a single value [ 40].

This default function employs median polish for expression summary and quantile normalization for data normalization.